A collection of automatic documents using the package yamlme.

## Installation

To install the development version, use the package remotes:

library(remotes)
install_github("kamapu/vegTemplates")

Before you use this package, you need to know the structure of objects defined as classes taxlist and vegtable. For the first case you can take a look into the article written by Alvarez & Luebert (2018).

Next to it, you may need experience working with rmarkdown and perhaps LaTeX and knitr, as well. They will be here implemented by the package yamlme.

## Examples

### Taxonomic checklist

Here an automatic checklist using the example data set released in the package taxlist (called Easplist).

library(taxlist)
library(vegTemplates)

checklist(Easplist, output_file = "ea-checklist", exclude = "family",
prefix = c(family = "# "), output = "html_document", alphabetic = TRUE)

With the option 'exclude = "family"' you prevent family names to be formatted in italics. With the option 'prefix = c(family = "# ")' you add a markdown command to set families as sections in the document. With the option 'output = "html_document"' we set the output as a HTML document instead of the default PDF.

Check the output here.