Merge concepts
Source:R/merge_taxa.R
, R/vegtable2kml.R
, R/match_names.R
, and 1 more
vegtable-deprecated.Rd
Merge taxon concepts form into single ones or insert accepted names to slot samples.
This method is applied to a function defined in the package taxlist-package
and only modify the slot species
in the input object
.
The use of taxa2samples()
with merge_to
argument will produce a similar
result as using merge_taxa
with level
argument, but taxa2samples()
will replace the records in slot samples by the respective accepted names
without any modification in slot species.
Additionally taxon concept IDs will be addes as columns in samples and taxon
traits if indicated in argument add_traits
.
This function is producing and displaying KML files.
Georeferenced plots can be quickly displayed in Google Earth using this function.
Names provided in a character vector will be compared with names stored in
slot taxonNames
of an object of class taxlist by using the
function stringdist::stringsim()
.
This method is applied to the slot species
in the input vegtable
object.
The functions listed below are deprecated and will be defuncti in the near future.
Arguments
- object
An object of class vegtable to be compared with.
- ...
Further arguments passed to
taxlist::match_names()
.- obj
Input object containing coordinate values.
- x
A character vector with names to be compared.
- concepts
Numeric (integer) vector including taxon concepts to be merged.
- level
Character value indicating the level to which the taxa have to be merged.
- file
Character value with the name of output file (including file extension).
- coords
Either a character vector or a formula indicating the names of coordinate values.
- srs
Spatial reference system as
proj4string
.
Author
Miguel Alvarez kamapu@posteo.de