Function reference • vegtable

All functions

`$`(<vegtable>) `$<-`(<vegtable>,<ANY>) `$`(<coverconvert>) `[`(<coverconvert>) `$<-`(<coverconvert>,<coverconvert>) `[`(<vegtable>) `[<-`(<vegtable>): Select or replace elements in objects

Kenya_veg: Vegetation-plots from Kenya

Wetlands: Vegetation-plots from Tanzania

add_releves() `add_releves<-`(): Merge relevés from data frames into vegtable objects

aspect_conv: Conversion of aspect classes to azimuth

braun_blanquet: Conversion of Braun-Blanquet codes to cover percentage

clean_once() clean(<vegtable>): Clean orphaned records in vegtable object

as.list(<vegtable>) as.list(<coverconvert>): Coerce objects to lists

count_taxa(<vegtable>,<missing>) count_taxa(<formula>,<vegtable>) `count_taxa<-`(): Count taxa included in vegtable objects

cover_trans(<character>,<coverconvert>) cover_trans(<factor>,<coverconvert>) cover_trans(<numeric>,<coverconvert>) cover_trans(<vegtable>,<missing>): Convert cover scales to percent cover

coverconvert coverconvert-class: Cover conversion tables

crosstable() cross2db(): Generating cross tables from database lists

df2coverconvert(): Create coverconvert objects

df2vegtable(): Convert a data frame into a vegtable object.

dune_veg: Dutch dune meadows as vegtable

header() `header<-`(): Retrieve or replace slot header in vegtable objects

layers2samples(): Add information from slot 'layers' into slot 'samples'

set_group() set_pseudo() set_formula() make_cocktail(): Produce a Cocktail classification

names(<vegtable>) dimnames(<vegtable>) names(<coverconvert>) `names<-`(<coverconvert>): Retrieve names of vegtable and coverconvert objects

new_layer() `new_layer<-`(): Insert new classification of vegetation layers

new_relation() `new_relation<-`(): Insert a new variable as relation in vegtable object

relation2header(): Insert variables from relations into header

shaker-class shaker: Class containing Cocktail algorithms.

subset(<vegtable>): Subset functions for vegtable objects

summary(<vegtable>) summary(<coverconvert>) summary(<shaker>) show(<vegtable>) print(<vegtable>) show(<coverconvert>) print(<coverconvert>) show(<shaker>) print(<shaker>): Summary method for vegtable objects

taxa2samples(): Insert taxon information into samples

trait_stats() trait_proportion(): Statistics and proportion for taxon traits

tv2vegtable() tv2coverconvert(): Import of vegetation data from Turboveg databases

update_det(): Update by determined specimens

used_synonyms() used_concepts(): Retrieve synonyms or taxon concepts used in a data set

veg_aggregate(): Aggregating information into a data frame

shannon() evenness() dominance() simpson() richness() veg_diversity(): Calculation of statistics at plot level

veg_layers: Information on vegetation layers

veg_relation() `veg_relation<-`(): Retrieve or replace relations in vegtable objects

vegtable-class vegtable: Class vegtable.

vegtable_stat(): General statistics from vegtable objects

write_juice() read_juice(): Exporting tables for Juice